STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48380.1PFAM: Copper resistance protein D; KEGG: mar:MAE_32200 hypothetical protein; SPTR: Genome sequencing data, contig C323. (148 aa)    
Predicted Functional Partners:
AFZ48789.1
KEGG: cyt:cce_3980 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.618
AFZ48013.1
PFAM: Late competence development protein ComFB; InterPro IPR019657; KEGG: syn:slr1505 hypothetical protein; PFAM: Late competence development protein ComFB; SPTR: Slr1505 protein.
  
     0.596
AFZ47368.1
Hypothetical protein; KEGG: cyh:Cyan8802_1974 sporulation domain protein; SPTR: Putative uncharacterized protein.
 
    0.580
AFZ47702.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.579
AFZ46210.1
Carbon dioxide concentrating mechanism protein; PFAM: Bacterial transferase hexapeptide (three repeats); InterPro IPR001451; KEGG: mar:MAE_47900 carbon dioxide concentrating mechanism protein; SPTR: Genome sequencing data, contig C303.
  
     0.577
AFZ47623.1
KEGG: cyc:PCC7424_2348 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.526
AFZ47787.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_1390 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.519
AFZ48558.1
PFAM: Domain of unknown function (DUF1824); InterPro IPR014953; KEGG: cyc:PCC7424_2049 hypothetical protein; PFAM: Domain of unknown function DUF1824; SPTR: Putative uncharacterized protein.
  
     0.498
AFZ46642.1
KEGG: cyt:cce_2107 hypothetical protein; SPTR: Slr0149 protein.
  
     0.490
AFZ47846.1
KEGG: cyc:PCC7424_0064 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.486
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.