STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48381.1Nitric oxide reductase, NorZ apoprotein; PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: amr:AM1_A0139 cytochrome b subunit of nitric oxide reductase; SPTR: Cytochrome b subunit of nitric oxide reductase. (769 aa)    
Predicted Functional Partners:
AFZ48382.1
PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR005829:IPR011701; KEGG: syp:SYNPCC7002_A1793 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Transporter, major facilitator family subfamily.
 
     0.623
AFZ47494.1
Assimilatory nitrite reductase (ferredoxin) precursor; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: precorrin-3B synthase; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR006066:IPR005117:IPR006067; KEGG: cyc:PCC7424_1683 ferredoxin-nitrite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Ferredoxin--nitrite reductase; SPTR: Nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domai [...]
      
 0.532
AFZ46817.1
PFAM: Curli production assembly/transport component CsgG; COGs: COG1462 Uncharacterized protein involved in formation of curli polymers; InterPro IPR005534; KEGG: ana:alr3345 hypothetical protein; PFAM: Curli production assembly/transport component CsgG; SPTR: Alr3345 protein.
  
     0.457
AFZ48314.1
PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641); TIGRFAM: radical SAM/Cys-rich domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: ana:alr3097 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: Alr3097 protein.
  
  
 0.418
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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