STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48421.1FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: mar:MAE_54440 FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase. (504 aa)    
Predicted Functional Partners:
AFZ47571.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.946
AFZ46584.1
Carotene isomerase; PFAM: FAD dependent oxidoreductase; TIGRFAM: carotene isomerase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076:IPR014101; KEGG: cyt:cce_1534 putative carotenoid isomerase; PFAM: FAD dependent oxidoreductase; SPTR: Carotene isomerase; TIGRFAM: carotene isomerase.
 
 
 0.945
AFZ47372.1
Hypothetical protein; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: cyc:PCC7424_3550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 
0.920
AFZ46762.1
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: cyc:PCC7424_2363 fatty acid desaturase; PFAM: fatty acid desaturase; SPTR: Fatty acid desaturase.
   
 
 0.909
AFZ46228.1
UDP-galactopyranose mutase; PFAM: Flavin containing amine oxidoreductase; Rieske [2Fe-2S] domain; COGs: COG3349 conserved hypothetical protein; InterPro IPR005805:IPR000759:IPR017941:IPR002937; KEGG: cyp:PCC8801_0517 amine oxidase; PFAM: amine oxidase; Rieske [2Fe-2S] iron-sulphur domain; SPTR: Amine oxidase.
     
 0.901
AFZ46547.1
Protein of unknown function DUF2358; PFAM: Uncharacterized conserved protein (DUF2358); InterPro IPR018790; KEGG: mar:MAE_47980 hypothetical protein; PFAM: Protein of unknown function DUF2358; SPTR: Similar to tr|Q4C2B1|Q4C2B1_CROWT Hypothetical protein.
  
     0.759
AFZ48682.1
PFAM: Protein of unknown function (DUF2499); InterPro IPR019634; KEGG: cyh:Cyan8802_4049 hypothetical protein; PFAM: Protein of unknown function DUF2499; SPTR: Putative uncharacterized protein; manually curated.
  
     0.733
AFZ46193.1
PFAM: Protein of unknown function (DUF3007); KEGG: cyt:cce_2129 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.731
AFZ47839.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: cyc:PCC7424_1887 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase.
  
     0.729
AFZ48274.1
Fibrillin; PFAM: PAP_fibrillin; KEGG: syn:sll1568 fibrillin; SPTR: Fibrillin.
  
     0.729
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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