STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48429.1KEGG: cyc:PCC7424_0507 hypothetical protein; SPTR: Putative uncharacterized protein. (223 aa)    
Predicted Functional Partners:
AFZ46642.1
KEGG: cyt:cce_2107 hypothetical protein; SPTR: Slr0149 protein.
  
     0.619
AFZ46637.1
4-vinyl reductase 4VR; PFAM: V4R domain; COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: cyc:PCC7424_1095 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR.
  
     0.570
AFZ46639.1
KEGG: cyn:Cyan7425_3171 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.570
AFZ46640.1
4-vinyl reductase 4VR; PFAM: V4R domain; COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: cyp:PCC8801_1056 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR.
  
     0.570
AFZ46435.1
PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: amr:AM1_4956 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: Cellulose synthase (UDP-forming).
 
     0.549
AFZ48743.1
KEGG: cyt:cce_4144 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.538
AFZ48430.1
PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070; KEGG: syp:SYNPCC7002_A1732 YrdC domain-containing protein; PFAM: SUA5/yciO/yrdC domain; SPTR: YrdC domain protein; Belongs to the SUA5 family.
       0.533
AFZ46240.1
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: cyn:Cyan7425_5058 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase.
  
     0.497
AFZ46641.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; COGs: COG0633 Ferredoxin; InterPro IPR001041; KEGG: cyn:Cyan7425_3169 ferredoxin; PFAM: ferredoxin; SPTR: Ferredoxin.
  
     0.496
AFZ48428.1
TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.492
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.