STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48434.1PFAM: Protein of unknown function (DUF3593); KEGG: mar:MAE_07250 hypothetical protein; SPTR: Similar to tr|Q8YNQ5|Q8YNQ5; manually curated. (96 aa)    
Predicted Functional Partners:
AFZ48682.1
PFAM: Protein of unknown function (DUF2499); InterPro IPR019634; KEGG: cyh:Cyan8802_4049 hypothetical protein; PFAM: Protein of unknown function DUF2499; SPTR: Putative uncharacterized protein; manually curated.
     0.971
AFZ48640.1
Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: cyc:PCC7424_3030 protein of unknown function YGGT; PFAM: protein of unknown function YGGT; SPTR: Putative uncharacterized protein.
  
     0.763
AFZ47172.1
PFAM: Cytochrome c; InterPro IPR009056:IPR008168:IPR003088; KEGG: npu:Npun_F1886 cytochrome c6; PFAM: cytochrome c class I; SPTR: Cytochrome c class I.
  
     0.754
AFZ48087.1
Ferredoxin; COGs: COG1141 Ferredoxin; InterPro IPR017896:IPR001080; KEGG: cyp:PCC8801_1897 ferredoxin; SPTR: Ferredoxin.
  
     0.747
AFZ48507.1
Hypothetical protein; PFAM: Chloroplast import component protein (Tic20); KEGG: cyc:PCC7424_4804 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
AFZ46193.1
PFAM: Protein of unknown function (DUF3007); KEGG: cyt:cce_2129 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.735
AFZ48156.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: cyt:cce_0488 hypothetical protein; PFAM: GUN4 domain protein; SPTR: Putative uncharacterized protein.
  
     0.735
AFZ47839.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: cyc:PCC7424_1887 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase.
  
     0.732
AFZ47759.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: cyt:cce_2572 photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing polypeptide.
  
     0.731
AFZ46284.1
PFAM: Protein of unknown function (DUF1092); InterPro IPR009472; KEGG: cyc:PCC7424_0060 protein of unknown function DUF1092; PFAM: protein of unknown function DUF1092; SPTR: Putative uncharacterized protein.
  
     0.728
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.