STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48461.1Neutral amino acid-binding protein; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: mar:MAE_32490 periplasmic binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Genome sequencing data, contig C319. (439 aa)    
Predicted Functional Partners:
AFZ47666.1
Neutral amino acid ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: mar:MAE_00300 amino acid transport system permease protein; PFAM: inner-membrane translocator; SPTR: Amino acid transport system permease protein.
 
 
 0.983
AFZ48366.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cyt:cce_3417 ATP-binding protein of ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter.
 
 
 0.981
AFZ48582.1
Neutral amino acid ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: cyt:cce_2946 branched-chain amino acid ABC transporter permease protein; PFAM: inner-membrane translocator; SPTR: Genome sequencing data, contig C326.
 
 
 0.980
AFZ48587.1
PFAM: ABC transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: cyh:Cyan8802_0745 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related.
 
 
 0.972
AFZ47667.1
Urea ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851:IPR017778; KEGG: mar:MAE_06200 UreA transport system permease protein; PFAM: inner-membrane translocator; SPTR: Urea transport system permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC.
 
  
 0.733
AFZ46404.1
Urea ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851:IPR017779; KEGG: cyc:PCC7424_2863 UreA ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; SPTR: Urea ABC transporter, permease protein UrtB; TIGRFAM: urea ABC transporter, permease protein UrtB.
 
  
 0.686
AFZ47253.1
PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR017780:IPR003439; KEGG: syp:SYNPCC7002_A1627 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE.
 
  
 0.607
AFZ48462.1
Hypothetical protein; TIGRFAM: DNA phosphorothioation-associated putative methyltransferase; KEGG: cyh:Cyan8802_1016 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.590
AFZ47413.1
PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000644:IPR003018:IPR000014:IPR001610:IPR 003661:IPR003594:IPR001789:IPR004358:IPR013767:IPR016132:I PR005467:IPR000700; KEGG: ava:Ava_1029 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; CBS domain containing protein; PAS fold domain pro [...]
  
 
 0.503
AFZ46058.1
Hypothetical protein; InterPro IPR020633; KEGG: cyc:PCC7424_4658 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.430
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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