STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48499.1PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003593:IPR003439:IPR017940:IPR001140:IPR 017871; KEGG: cyp:PCC8801_2726 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter related. (598 aa)    
Predicted Functional Partners:
AFZ46987.1
PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR003439:IPR017940:IPR001140; KEGG: cyc:PCC7424_4484 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter related.
  
  
 
0.923
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
  
 0.785
AFZ46265.1
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Sulfotransferase domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR000639:IPR009081:IPR006162:IPR018201:IPR 000873:IPR006163:IPR014030:IPR014031:IPR014043:IPR013968:I PR000863:IPR000073; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; AMP-dependent synthetase and ligase; Acyl transferase; KR do [...]
  
 0.785
AFZ48500.1
CoA-binding domain protein; PFAM: CoA binding domain; ATP-grasp domain; Acetyltransferase (GNAT) family; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR011761:IPR000182:IPR003781:IPR013650; KEGG: ana:all0769 acetyl-CoA synthetase; PFAM: CoA-binding domain protein; ATP-grasp domain protein; GCN5-related N-acetyltransferase; SPTR: Acetyl-CoA synthetase.
     
 0.774
AFZ46283.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR000595:IPR003439:IPR017940:IPR 005074:IPR017871:IPR001140:IPR010132; KEGG: cyt:cce_2355 toxin secretion ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; cyc [...]
 
 
0.679
AFZ46531.1
PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cyn:Cyan7425_4191 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related.
     
0.677
AFZ46629.1
Bacteriocin-processing peptidase; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR000595:IPR003439:IPR017940:IPR005074:IPR 017871:IPR001140:IPR003593; KEGG: cyt:cce_2670 ABC transporter ATP-binding protein; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; cyclic nucleotide-binding; A [...]
 
 
  
0.648
AFZ48498.1
Chorismate lyase; PFAM: Protein of unknown function (DUF98); COGs: COG3161 4-hydroxybenzoate synthetase (chorismate lyase); KEGG: cyc:PCC7424_0375 protein of unknown function DUF564; SPTR: Putative uncharacterized protein.
       0.530
AFZ48359.1
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003439:IPR005890:IPR003593; KEGG: syn:sll1453 nitrate transport protein; NrtD; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate transport protein; NrtD; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
 
    
0.458
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.420
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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