STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48524.1PFAM: PspA/IM30 family; COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: cyc:PCC7424_2144 phage shock protein A, PspA; PFAM: PspA/IM30 family protein; SPTR: PspA/IM30 family. (259 aa)    
Predicted Functional Partners:
AFZ46070.1
PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR000014:IPR003018:IPR003661:IPR 003594:IPR001789:IPR005467:IPR020606:IPR013656; KEGG: gvi:glr0718 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase [...]
    
 
 0.695
AFZ47818.1
PAS/PAC sensor hybrid histidine kinase; PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR000644:IPR013655:IPR013767:IPR 003661:IPR003594:IPR001789:IPR001610:IPR005467:IPR000700:I PR004358; KEGG: hmo:HM1_1611 sensor histidine kinase, putative; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; CBS domain containing protein; PAS fold domain protein; histidi [...]
    
 
 0.695
AFZ48032.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR013655:IPR003018:IPR003661:IPR 003594:IPR001789:IPR001610:IPR005467:IPR000700:IPR004358; KEGG: gfo:GFO_0848 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; GAF domain protein; response regulator rec [...]
    
 
 0.695
AFZ46025.1
Nitrogen assimilation regulatory protein; PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain; COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; InterPro IPR000595:IPR002078:IPR017896:IPR017900; KEGG: cyc:PCC7424_3607 cyclic nucleotide-binding protein; PFAM: sigma-54 factor interaction domain-containing protein; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein.
   
 
 0.685
AFZ47975.1
PFAM: SPFH domain / Band 7 family; COGs: COG2268 conserved hypothetical protein; InterPro IPR001107; KEGG: cyc:PCC7424_4040 band 7 protein; PFAM: band 7 protein; SPTR: Band 7 protein.
  
  
 0.431
AFZ48525.1
PFAM: Protein kinase domain; Pentapeptide repeats (8 copies); COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635:IPR002290:IPR000719:IPR016252:IPR 017442:IPR001646:IPR017441; KEGG: cyc:PCC7424_0205 serine/threonine protein kinase with pentapeptide repeats; PFAM: Serine/threonine-protein kinase-like domain; pentapeptide repeat protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Eukariotic protein kinase.
       0.426
AFZ48526.1
PFAM: Aminotransferase class IV; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: cyp:PCC8801_4306 aminotransferase class IV; PFAM: aminotransferase class IV; SPTR: Aminotransferase class IV.
       0.426
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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