STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48532.1KEGG: cyc:PCC7424_0120 hypothetical protein; SPTR: Putative uncharacterized protein. (72 aa)    
Predicted Functional Partners:
AFZ47457.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: cyc:PCC7424_1681 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: PBS lyase HEAT-like repeat domain protein.
  
     0.719
AFZ46408.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209:IPR017295; KEGG: cyc:PCC7424_0119 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin.
 
     0.702
AFZ46719.1
KEGG: cyc:PCC7424_2076 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.645
AFZ46633.1
KEGG: cyh:Cyan8802_4218 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.601
AFZ46902.1
KEGG: cyn:Cyan7425_4103 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.561
AFZ47294.1
KEGG: cyc:PCC7424_0871 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.548
AFZ46147.1
KEGG: npu:Npun_F0692 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.533
AFZ47325.1
KEGG: ana:asl1795 hypothetical protein; SPTR: Asl1795 protein.
  
     0.522
AFZ48378.1
PFAM: Protein of unknown function (DUF2808); KEGG: cyc:PCC7424_1395 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.516
AFZ48595.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649; KEGG: cyc:PCC7424_1578 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.496
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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