STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48543.1KEGG: syn:slr5016 hypothetical protein; SPTR: Putative uncharacterized protein. (374 aa)    
Predicted Functional Partners:
AFZ48544.1
KEGG: cyt:cce_5246 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.693
AFZ47801.1
Hypothetical protein; InterPro IPR020336; KEGG: npu:Npun_R0316 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.614
AFZ48545.1
KEGG: ava:Ava_B0312 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.592
AFZ48683.1
KEGG: syn:sll1381 hypothetical protein; SPTR: Sll1381 protein.
  
     0.522
AFZ47231.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: rrs:RoseRS_1435 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
  
     0.504
AFZ48542.1
PFAM: Phosphoadenosine phosphosulfate reductase family; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500; KEGG: cyt:cce_5239 hypothetical protein; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: Putative uncharacterized protein.
       0.494
AFZ48471.1
PFAM: PAP_fibrillin; KEGG: cyc:PCC7424_0980 PAP fibrillin family protein; SPTR: PAP fibrillin family protein.
  
     0.477
AFZ47702.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.421
AFZ48784.1
KEGG: syp:SYNPCC7002_A1946 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.413
AFZ48546.1
Protein of unknown function DUF81; PFAM: Sulfite exporter TauE/SafE; COGs: COG0730 permease; InterPro IPR002781; KEGG: protein of unknown function DUF81; PFAM: protein of unknown function DUF81; SPTR: Membrane protein.
 
     0.408
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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