STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48553.1PFAM: Tetratricopeptide repeat; COGs: COG4421 Capsular polysaccharide biosynthesis protein; InterPro IPR019734:IPR013026:IPR001440; KEGG: ter:Tery_0122 glycosyl transferase, group 1; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat protein. (760 aa)    
Predicted Functional Partners:
AFZ48622.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013026:IPR001440; KEGG: cyt:cce_2288 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein.
 
     0.659
AFZ47711.1
Hypothetical protein; KEGG: tva:TVAG_030630 viral A-type inclusion protein; SPTR: Putative uncharacterized protein.
  
     0.654
AFZ47323.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734:IPR001440:IPR013026; KEGG: syn:sll0837 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Sll0837 protein.
 
     0.648
AFZ46402.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734:IPR013026; KEGG: ava:Ava_B0299 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat.
 
     0.640
AFZ46247.1
PFAM: Protein of unknown function (DUF3038); KEGG: cyc:PCC7424_4010 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
AFZ48267.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734:IPR013026; KEGG: cyp:PCC8801_0882 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein.
  
     0.599
AFZ48554.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; InterPro IPR017936:IPR013766:IPR017937; KEGG: cyh:Cyan8802_2340 thioredoxin domain protein; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin domain protein.
       0.527
AFZ46726.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013026:IPR001440; KEGG: syn:slr0751 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein slr0751.
 
     0.524
AFZ47094.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: cyc:PCC7424_2390 TonB family protein; SPTR: TonB family protein; TIGRFAM: TonB family protein.
  
     0.494
AFZ46989.1
COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: pna:Pnap_4258 superfamily I DNA/RNA helicase; SPTR: Putative uncharacterized protein.
  
     0.473
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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