STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48566.1Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; COGs: COG0383 Alpha-mannosidase; InterPro IPR000602:IPR015341:IPR011682; KEGG: cyc:PCC7424_4232 glycosyl hydrolase 38 domain protein; PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; PRIAM: Alpha-mannosidase; SPTR: Glycosyl hydrolase 38 domain protein. (1053 aa)    
Predicted Functional Partners:
AFZ48567.1
UspA domain-containing protein; PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016:IPR006015; KEGG: cyc:PCC7424_5095 UspA domain protein; PFAM: UspA domain-containing protein; SPTR: UspA domain protein.
       0.517
AFZ47519.1
PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: cyc:PCC7424_5352 ROK family protein; PFAM: ROK family protein; SPTR: ROK family protein.
 
  
 0.513
AFZ46311.1
PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: cyt:cce_4673 beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: Beta-glucosidase.
 
  
 0.461
panC/cmk
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
  
    0.420
AFZ48431.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cyt:cce_3418 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Bacterial extracellular solute-binding protein, putative.
 
     0.417
AFZ48326.1
Amylo-alpha-16-glucosidase; PFAM: Amylo-alpha-1,6-glucosidase; COGs: COG3408 Glycogen debranching protein; InterPro IPR010401; KEGG: cyc:PCC7424_2675 amylo-alpha-16-glucosidase; PFAM: Amylo-alpha-16-glucosidase; SPTR: Amylo-alpha-1,6-glucosidase family.
   
    0.416
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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