STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48599.1KEGG: npu:Npun_R4524 hypothetical protein; SPTR: Putative uncharacterized protein. (92 aa)    
Predicted Functional Partners:
AFZ48595.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649; KEGG: cyc:PCC7424_1578 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.852
AFZ48581.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; InterPro IPR007227; KEGG: cyc:PCC7424_3389 rod shape-determining protein MreD; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD.
  
     0.757
AFZ48092.1
KEGG: cyc:PCC7424_2998 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.739
AFZ48598.1
Putative CheA signal transduction histidine kinase; PFAM: Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207; KEGG: cyh:Cyan8802_4111 putative CheA signal transduction histidine kinase; PFAM: Hpt domain protein; SMART: Hpt domain protein; SPTR: Putative CheA signal transduction histidine kinase.
       0.728
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.723
AFZ48597.1
KEGG: cyh:Cyan8802_4259 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.723
AFZ48155.1
KEGG: cyc:PCC7424_1467 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.711
AFZ46125.1
KEGG: cyh:Cyan8802_2637 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
AFZ47529.1
KEGG: cyh:Cyan8802_0633 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.659
AFZ46548.1
PFAM: Protein of unknown function (DUF3493); InterPro IPR017441; KEGG: cyt:cce_1927 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.642
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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