STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48626.1PFAM: Transglutaminase-like superfamily; COGs: COG5279 Uncharacterized protein involved in cytokinesis contains TGc (transglutaminase/protease-like) domain; InterPro IPR002931; KEGG: syn:sll1681 hypothetical protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Sll1681 protein. (489 aa)    
Predicted Functional Partners:
AFZ47094.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: cyc:PCC7424_2390 TonB family protein; SPTR: TonB family protein; TIGRFAM: TonB family protein.
  
     0.685
AFZ48625.1
PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: npu:Npun_R0669 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein.
       0.682
AFZ47780.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440; KEGG: cyn:Cyan7425_5127 superfamily I DNA and RNA helicase-like protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Superfamily I DNA and RNA helicase-like protein.
  
     0.612
AFZ46851.1
Hypothetical protein; KEGG: mpe:MYPE6470 DNA topoisomerase IV subunit A; SPTR: Putative uncharacterized protein.
  
     0.583
AFZ47600.1
PFAM: Protein of unknown function (DUF3750); KEGG: cyh:Cyan8802_1668 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.545
AFZ46708.1
PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG3920 Signal transduction histidine kinase; InterProIPR016132:IPR005467:IPR000014:IPR000700:IPR 000644:IPR003018:IPR013655:IPR013767:IPR011495:IPR003594:I PR001610; KEGG: cyb:CYB_1653 sensory box histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; GAF domain protein; CBS domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; CBS domain cont [...]
  
    0.534
AFZ47711.1
Hypothetical protein; KEGG: tva:TVAG_030630 viral A-type inclusion protein; SPTR: Putative uncharacterized protein.
  
     0.502
AFZ46011.1
PFAM: GtrA-like protein; InterPro IPR007267; KEGG: lsl:LSL_1271 cell wall teichoic acid glycosylation protein GtcA; PFAM: GtrA family protein; SPTR: Genome sequencing data, contig C200.
  
     0.487
AFZ46673.1
KEGG: cyh:Cyan8802_3627 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.478
AFZ48193.1
Hypothetical protein; KEGG: cyn:Cyan7425_5127 superfamily I DNA and RNA helicase-like protein; SPTR: Superfamily I DNA and RNA helicase-like protein.
  
     0.470
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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