STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48640.1Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: cyc:PCC7424_3030 protein of unknown function YGGT; PFAM: protein of unknown function YGGT; SPTR: Putative uncharacterized protein. (95 aa)    
Predicted Functional Partners:
AFZ48507.1
Hypothetical protein; PFAM: Chloroplast import component protein (Tic20); KEGG: cyc:PCC7424_4804 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.770
AFZ47759.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: cyt:cce_2572 photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing polypeptide.
  
     0.769
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; InterPro IPR005610; KEGG: cyt:cce_1599 photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family.
  
     0.768
AFZ48682.1
PFAM: Protein of unknown function (DUF2499); InterPro IPR019634; KEGG: cyh:Cyan8802_4049 hypothetical protein; PFAM: Protein of unknown function DUF2499; SPTR: Putative uncharacterized protein; manually curated.
  
     0.767
AFZ46193.1
PFAM: Protein of unknown function (DUF3007); KEGG: cyt:cce_2129 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.764
AFZ48434.1
PFAM: Protein of unknown function (DUF3593); KEGG: mar:MAE_07250 hypothetical protein; SPTR: Similar to tr|Q8YNQ5|Q8YNQ5; manually curated.
  
     0.763
AFZ46775.1
Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.758
AFZ47879.1
KEGG: cyc:PCC7424_4510 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.757
psaE
Photosystem I reaction centre subunit IV/PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.756
AFZ46842.1
PFAM: Protein of unknown function (DUF3464); KEGG: cyh:Cyan8802_2334 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.751
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.