STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48644.1Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: cyc:PCC7424_1445 glycosyl transferase family 39; SPTR: Glycosyl transferase family 39. (429 aa)    
Predicted Functional Partners:
AFZ47827.1
KEGG: ava:Ava_3212 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
AFZ47010.1
KEGG: cyt:cce_1644 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
AFZ46897.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein.
  
   
 0.727
AFZ47513.1
InterPro IPR001440:IPR019734:IPR013026; KEGG: cyc:PCC7424_3039 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein.
  
     0.727
AFZ46442.1
KEGG: cyt:cce_2662 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.716
AFZ47793.1
KEGG: cyc:PCC7424_0174 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.707
AFZ48095.1
PFAM: Protein of unknown function (DUF3769); InterPro IPR010664; KEGG: cyc:PCC7424_5033 OstA family protein; PFAM: protein of unknown function DUF1239; SPTR: OstA family protein.
 
     0.703
AFZ48439.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: cyc:PCC7424_5328 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
  
     0.700
AFZ48051.1
PFAM: Protein of unknown function (DUF3153); KEGG: cyh:Cyan8802_1546 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.688
AFZ48370.1
PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: mar:MAE_24030 putative O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: Putative O-antigen polymerase.
 
     0.685
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.