STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48658.1PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: cyc:PCC7424_1433 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein. (181 aa)    
Predicted Functional Partners:
AFZ48657.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: npu:Npun_F0908 hypothetical protein; PFAM: protein of unknown function DUF29; SPTR: Putative uncharacterized protein.
 
     0.715
AFZ48654.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_F1244 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
 
     0.700
AFZ47778.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: syn:slr2084 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Slr2084 protein.
  
     0.672
AFZ46028.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyh:Cyan8802_2042 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.666
AFZ46330.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyh:Cyan8802_2042 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.643
AFZ48057.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_3655 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.613
AFZ48656.1
PFAM: Protein of unknown function (DUF433); COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: syn:slr1209 hypothetical protein; PFAM: protein of unknown function DUF433; SPTR: Slr1209 protein.
 
     0.606
AFZ46338.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_R4112 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.530
AFZ48655.1
KEGG: ava:Ava_0675 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.525
AFZ47705.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: mar:MAE_07110 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.524
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.