STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48671.1PFAM: Protein of unknown function (DUF3285); KEGG: cyt:cce_2890 hypothetical protein; SPTR: Putative uncharacterized protein. (60 aa)    
Predicted Functional Partners:
AFZ48503.1
KEGG: cyt:cce_3269 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.749
AFZ46097.1
PFAM: Protein of unknown function (DUF3288); KEGG: cyn:Cyan7425_2640 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.704
AFZ47782.1
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: cyc:PCC7424_1376 CO2 hydration protein; PFAM: CO2 hydration family protein; SPTR: CO2 hydration protein; TIGRFAM: CO2 hydration protein.
  
     0.699
AFZ48738.1
KEGG: mar:MAE_22040 CAB/ELIP/HLIP-related protein; SPTR: CAB/ELIP/HLIP-related protein.
  
     0.694
AFZ47310.1
PFAM: Protein of unknown function (DUF2396); TIGRFAM: TIGR02652 family protein; InterPro IPR013472; KEGG: cyh:Cyan8802_3023 hypothetical protein; PFAM: Conserved hypothetical protein CHP02652; SPTR: Putative uncharacterized protein.
  
     0.691
AFZ48335.1
KEGG: cyc:PCC7424_3354 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.680
AFZ47184.1
KEGG: cyp:PCC8801_0357 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.671
AFZ46903.1
KEGG: mar:MAE_35130 transcriptional regulator; SPTR: Transcriptional regulator.
  
     0.647
AFZ48631.1
KEGG: cyc:PCC7424_3505 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.625
ndhO
Component of NDH complex; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.608
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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