STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48709.1PFAM: Family of unknown function (DUF490); InterPro IPR007452; KEGG: cyc:PCC7424_2994 protein of unknown function DUF490; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein. (1848 aa)    
Predicted Functional Partners:
AFZ47297.1
KEGG: cyh:Cyan8802_4210 type II and III secretion system protein; SPTR: Type II and III secretion system protein.
  
     0.760
AFZ48635.1
KEGG: cyc:PCC7424_4228 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.751
AFZ47840.1
KEGG: cyc:PCC7424_1888 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.741
AFZ48322.1
PFAM: Protein of unknown function (DUF3120); KEGG: cyc:PCC7424_4190 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.733
AFZ47467.1
Hypothetical protein; KEGG: cyh:Cyan8802_0343 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor.
  
     0.732
AFZ46412.1
KEGG: cyc:PCC7424_4388 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.717
AFZ48158.1
Heat shock protein DnaJ domain protein; PFAM: DnaJ domain; InterPro IPR001623; KEGG: syp:SYNPCC7002_A0354 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SPTR: Putative uncharacterized protein.
  
   
 0.707
AFZ47241.1
KEGG: cyt:cce_3573 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.703
AFZ48201.1
COGs: COG1837 RNA-binding protein (contains KH domain); KEGG: cyc:PCC7424_5263 hypothetical protein; SPTR: Similar to RNA-binding protein (Contains KH domain).
  
     0.695
AFZ46897.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein.
  
     0.693
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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