STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48742.1PFAM: Recombinase; InterPro IPR011109; KEGG: cyc:PCC7424_3086 recombinase; PFAM: Recombinase; SPTR: Recombinase. (442 aa)    
Predicted Functional Partners:
AFZ48743.1
KEGG: cyt:cce_4144 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.868
AFZ48352.1
PFAM: Protein of unknown function (DUF2973); KEGG: cyt:cce_4730 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.762
AFZ47495.1
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964:IPR018117; KEGG: syp:SYNPCC7002_A2395 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.759
AFZ46058.1
Hypothetical protein; InterPro IPR020633; KEGG: cyc:PCC7424_4658 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
AFZ47846.1
KEGG: cyc:PCC7424_0064 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.743
AFZ46936.1
KEGG: mar:MAE_31860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.738
AFZ46258.1
PFAM: Protein of unknown function (DUF2949); KEGG: cyc:PCC7424_0922 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.730
AFZ47606.1
KEGG: cyp:PCC8801_1277 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.725
AFZ46983.1
KEGG: cyc:PCC7424_4185 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.720
AFZ47112.1
KEGG: cyc:PCC7424_4776 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.710
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.