STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48748.1PFAM: Protein of unknown function (DUF3611); KEGG: mar:MAE_03540 hypothetical protein; SPTR: Similar to P72815_SYNY3 Sll1656 protein. (199 aa)    
Predicted Functional Partners:
AFZ46284.1
PFAM: Protein of unknown function (DUF1092); InterPro IPR009472; KEGG: cyc:PCC7424_0060 protein of unknown function DUF1092; PFAM: protein of unknown function DUF1092; SPTR: Putative uncharacterized protein.
  
     0.726
AFZ48776.1
KEGG: ana:alr1246 hypothetical protein; SPTR: Alr1246 protein.
  
     0.721
AFZ47835.1
PFAM: Protein of unknown function (DUF1350); InterPro IPR010765; KEGG: cyp:PCC8801_3548 protein of unknown function DUF1350; PFAM: protein of unknown function DUF1350; SPTR: Putative uncharacterized protein.
  
     0.716
AFZ47759.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: cyt:cce_2572 photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing polypeptide.
  
     0.713
AFZ46535.1
PFAM: Vitamin K epoxide reductase family; COGs: COG4243 membrane protein; InterPro IPR012932; KEGG: syp:SYNPCC7002_A0564 hypothetical protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; SPTR: Putative uncharacterized protein.
  
     0.701
AFZ48156.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: cyt:cce_0488 hypothetical protein; PFAM: GUN4 domain protein; SPTR: Putative uncharacterized protein.
  
     0.695
AFZ46842.1
PFAM: Protein of unknown function (DUF3464); KEGG: cyh:Cyan8802_2334 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.692
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; InterPro IPR005610; KEGG: cyt:cce_1599 photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family.
  
     0.683
AFZ46193.1
PFAM: Protein of unknown function (DUF3007); KEGG: cyt:cce_2129 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.668
AFZ46416.1
PFAM: Domain of unknown function (DUF1995); InterPro IPR018962; KEGG: syp:SYNPCC7002_A0014 hypothetical protein; PFAM: Domain of unknown function DUF1995; SPTR: Putative uncharacterized protein.
  
     0.667
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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