STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48773.1Hypothetical protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: amr:AM1_5879 prepilin-type N-terminal cleavage/methylation domain-containing protein; SPTR: Prepilin-type N-cleavage/methylation domain protein. (256 aa)    
Predicted Functional Partners:
AFZ46276.1
PFAM: S23 ribosomal protein; KEGG: ret:RHE_CH01605 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.638
AFZ46617.1
PFAM: S23 ribosomal protein; KEGG: gfo:GFO_1046 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.638
AFZ48662.1
General secretion pathway protein G; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: syn:sll1694 general secretion pathway protein G; SPTR: General secretion pathway protein G.
  
 
 0.638
AFZ48663.1
General secretion pathway protein G; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902:IPR001120; KEGG: syn:sll1694 general secretion pathway protein G; SPTR: General secretion pathway protein G.
  
 
 0.638
AFZ48774.1
KEGG: cyn:Cyan7425_0373 hypothetical protein; SPTR: Putative uncharacterized protein.
      
0.539
AFZ48775.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1821); KEGG: cyc:PCC7424_1970 hypothetical protein; SPTR: Conserved domain protein.
       0.408
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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