STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48775.1Hypothetical protein; PFAM: Domain of unknown function (DUF1821); KEGG: cyc:PCC7424_1970 hypothetical protein; SPTR: Conserved domain protein. (158 aa)    
Predicted Functional Partners:
AFZ46768.1
KEGG: cyh:Cyan8802_2727 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.764
AFZ46983.1
KEGG: cyc:PCC7424_4185 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.755
AFZ46229.1
KEGG: syp:SYNPCC7002_A1544 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.752
AFZ46906.1
Hypothetical protein; KEGG: npu:Npun_F4027 S-layer domain-containing protein; SPTR: S-layer domain protein.
  
     0.733
AFZ47310.1
PFAM: Protein of unknown function (DUF2396); TIGRFAM: TIGR02652 family protein; InterPro IPR013472; KEGG: cyh:Cyan8802_3023 hypothetical protein; PFAM: Conserved hypothetical protein CHP02652; SPTR: Putative uncharacterized protein.
  
     0.723
AFZ46097.1
PFAM: Protein of unknown function (DUF3288); KEGG: cyn:Cyan7425_2640 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.718
AFZ46272.1
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: cyc:PCC7424_1354 Mo-dependent nitrogenase family protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase family protein.
  
     0.714
AFZ46210.1
Carbon dioxide concentrating mechanism protein; PFAM: Bacterial transferase hexapeptide (three repeats); InterPro IPR001451; KEGG: mar:MAE_47900 carbon dioxide concentrating mechanism protein; SPTR: Genome sequencing data, contig C303.
  
     0.713
AFZ47529.1
KEGG: cyh:Cyan8802_0633 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.711
AFZ47495.1
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964:IPR018117; KEGG: syp:SYNPCC7002_A2395 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.710
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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