STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48818.1PFAM: Protein of unknown function (DUF3539); KEGG: cyt:cce_2716 hypothetical protein; SPTR: Putative uncharacterized protein. (89 aa)    
Predicted Functional Partners:
AFZ48346.1
PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002332:IPR017918:IPR002187; KEGG: cyn:Cyan7425_2735 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.970
AFZ46501.1
Transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; TIGRFAM: global nitrogen regulator NtcA, cyanobacterial; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808:IPR012318:IPR018335; KEGG: cyh:Cyan8802_2082 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; SPTR: Nitrogen-responsive regulatory protein.
  
 
 0.945
AFZ46520.1
PFAM: Protein of unknown function (DUF3155); KEGG: mar:MAE_14400 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ46125.1
KEGG: cyh:Cyan8802_2637 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFZ46548.1
PFAM: Protein of unknown function (DUF3493); InterPro IPR017441; KEGG: cyt:cce_1927 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
  0.771
AFZ46903.1
KEGG: mar:MAE_35130 transcriptional regulator; SPTR: Transcriptional regulator.
  
     0.765
AFZ48595.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649; KEGG: cyc:PCC7424_1578 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.752
AFZ46719.1
KEGG: cyc:PCC7424_2076 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.750
AFZ46578.1
PFAM: Cytochrome c; InterPro IPR003088:IPR009056; KEGG: cyt:cce_3264 cytochrome cM; PFAM: cytochrome c class I; SPTR: Cytochrome cM.
  
     0.746
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.