STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY27305.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (604 aa)    
Predicted Functional Partners:
AFY27306.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
  
  
 0.792
AFY27304.1
PFAM: GtrA-like protein; Glycosyl transferase family 2.
 
  
 0.790
AFY28984.1
PFAM: Glycosyl transferase family 2.
 
    0.776
AFY27307.1
PFAM: Domain of unknown function (DUF1824).
       0.773
AFY30304.1
PFAM: Glycosyl transferase family 2.
  
    0.671
AFY30193.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.559
AFY29299.1
PFAM: Glycosyl transferase family 2.
  
    0.557
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
       0.520
AFY30021.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase.
  
     0.518
AFY27309.1
PFAM: Voltage gated chloride channel.
       0.517
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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