STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY28029.1NTF2 domain-containing protein; PFAM: Nuclear transport factor 2 (NTF2) domain; Orange carotenoid protein, N-terminal; Belongs to the orange carotenoid-binding protein family. (318 aa)    
Predicted Functional Partners:
AFY30157.1
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.818
AFY30154.1
Phycobilisome core linker protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.783
AFY28028.1
PFAM: Fatty acid desaturase.
 
   
 0.780
AFY27598.1
PFAM: Protein of unknown function (DUF2605).
  
     0.772
AFY27744.1
Allophycocyanin alpha-B subunit apoprotein; PFAM: Phycobilisome protein.
  
 
 
 0.772
AFY28030.1
PFAM: Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
 
 
   0.768
AFY27286.1
Hypothetical protein.
  
     0.765
AFY30156.1
Allophycocyanin alpha subunit apoprotein; PFAM: Phycobilisome protein.
  
 
 
 0.751
AFY28134.1
Putative membrane protein; PFAM: Phosphate-starvation-inducible E.
  
     0.750
AFY28700.1
PFAM: Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
   0.746
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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