STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY28035.1ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990). (270 aa)    
Predicted Functional Partners:
AFY28036.1
ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990).
 
  
 0.966
AFY28034.1
ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.962
AFY28037.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
       0.773
AFY28033.1
Hypothetical protein.
       0.741
AFY30031.1
Hypothetical protein.
  
     0.669
AFY27677.1
PFAM: Protein of unknown function (DUF3148).
  
     0.580
AFY29720.1
Hypothetical protein.
  
     0.535
AFY27887.1
Hypothetical protein.
  
     0.487
AFY27623.1
PFAM: Protein of unknown function (DUF3288).
  
     0.478
AFY29026.1
PFAM: Protein of unknown function (DUF565).
  
     0.473
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.