STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY28191.1Pirin-related protein; PFAM: Pirin; Belongs to the pirin family. (230 aa)    
Predicted Functional Partners:
AFY28190.1
Putative flavoprotein; PFAM: NADPH-dependent FMN reductase.
 
  
 0.822
AFY28189.1
PFAM: NADH:flavin oxidoreductase / NADH oxidase family.
     
 0.784
AFY28192.1
Hypothetical protein.
       0.746
AFY28193.1
Hypothetical protein.
       0.716
AFY28188.1
Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
     
 0.611
AFY28867.1
Hypothetical protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
 
  
 0.564
AFY28194.1
PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal.
       0.495
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.