STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY28234.1PFAM: Bacterial regulatory proteins, crp family. (210 aa)    
Predicted Functional Partners:
AFY28233.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
 
 0.797
AFY28232.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
   
   0.786
AFY29918.1
PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain.
  
     0.761
AFY28231.1
PFAM: Aminotransferase class I and II.
       0.664
AFY29996.1
PFAM: Cyclic nucleotide-binding domain.
  
     0.572
AFY28235.1
Hypothetical protein; PFAM: CHAD domain.
       0.561
AFY27278.1
PFAM: Cyclic nucleotide-binding domain.
  
   
 0.553
AFY28236.1
TIGRFAM: phosphate binding protein.
  
    0.536
corA
Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.483
AFY28242.1
PFAM: Cyclic nucleotide-binding domain.
  
   
 0.428
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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