STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY28385.1Hypothetical protein. (435 aa)    
Predicted Functional Partners:
AFY28382.1
PFAM: Galactosyltransferase; Glycosyl transferase family 2.
  
  
 0.796
AFY28383.1
PFAM: Glycosyl transferase family 2.
  
    0.785
AFY28388.1
PFAM: Glycosyl transferase family 2.
  
    0.785
AFY28380.1
Hypothetical protein.
  
    0.775
AFY28384.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2.
  
    0.775
AFY28381.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.773
AFY28386.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.773
AFY28387.1
Hypothetical protein.
       0.773
AFY28379.1
Hypothetical protein.
       0.701
AFY28377.1
PFAM: Glycosyl transferase family 2.
  
    0.682
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.