STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY28932.1Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase. (351 aa)    
Predicted Functional Partners:
AFY28930.1
TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.852
AFY28931.1
Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.840
AFY27960.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain.
  
   
 0.704
AFY28933.1
Hypothetical protein.
       0.603
AFY28934.1
Heat shock protein; PFAM: META domain.
       0.603
AFY29900.1
Hypothetical protein.
  
     0.600
AFY28461.1
Hypothetical protein.
  
     0.591
AFY27958.1
Putative phosphatase; PFAM: Bacterial protein of unknown function (DUF839).
 
   
 0.577
AFY28238.1
Hypothetical protein.
  
     0.576
AFY30413.1
Hypothetical protein; PFAM: YCII-related domain.
  
    0.572
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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