STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY29160.1Hypothetical protein; PFAM: PIN domain. (130 aa)    
Predicted Functional Partners:
AFY29161.1
Antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
    0.901
AFY29585.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
    0.773
AFY27314.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
    0.772
AFY29490.1
Hypothetical protein; PFAM: PIN domain.
  
     0.759
AFY29157.1
PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family.
       0.559
AFY29158.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein.
       0.559
AFY29159.1
PFAM: HlyD family secretion protein; TIGRFAM: ABC exporter membrane fusion protein, DevB family.
       0.559
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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