Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY27555.1 | AFY28401.1 | Cyagr_0361 | Cyagr_1223 | Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase; STAS domain; TIGRFAM: anti-anti-sigma factor. | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family. | 0.959 |
AFY27555.1 | AFY29269.1 | Cyagr_0361 | Cyagr_2153 | Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase; STAS domain; TIGRFAM: anti-anti-sigma factor. | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | 0.408 |
AFY27555.1 | AFY29270.1 | Cyagr_0361 | Cyagr_2154 | Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase; STAS domain; TIGRFAM: anti-anti-sigma factor. | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | 0.412 |
AFY27555.1 | AFY29293.1 | Cyagr_0361 | Cyagr_2180 | Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase; STAS domain; TIGRFAM: anti-anti-sigma factor. | PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.844 |
AFY28299.1 | AFY29269.1 | Cyagr_1120 | Cyagr_2153 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | 0.624 |
AFY28299.1 | AFY29293.1 | Cyagr_1120 | Cyagr_2180 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.705 |
AFY28401.1 | AFY27555.1 | Cyagr_1223 | Cyagr_0361 | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family. | Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase; STAS domain; TIGRFAM: anti-anti-sigma factor. | 0.959 |
AFY28401.1 | AFY29269.1 | Cyagr_1223 | Cyagr_2153 | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family. | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | 0.470 |
AFY28401.1 | AFY29270.1 | Cyagr_1223 | Cyagr_2154 | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family. | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | 0.533 |
AFY28401.1 | AFY29293.1 | Cyagr_1223 | Cyagr_2180 | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family. | PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.679 |
AFY29267.1 | AFY29268.1 | Cyagr_2151 | Cyagr_2152 | tRNA nucleotidyltransferase/poly(A) polymerase; PFAM: Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Hypothetical protein. | 0.442 |
AFY29267.1 | AFY29269.1 | Cyagr_2151 | Cyagr_2153 | tRNA nucleotidyltransferase/poly(A) polymerase; PFAM: Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | 0.442 |
AFY29268.1 | AFY29267.1 | Cyagr_2152 | Cyagr_2151 | Hypothetical protein. | tRNA nucleotidyltransferase/poly(A) polymerase; PFAM: Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.442 |
AFY29268.1 | AFY29269.1 | Cyagr_2152 | Cyagr_2153 | Hypothetical protein. | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | 0.775 |
AFY29269.1 | AFY27555.1 | Cyagr_2153 | Cyagr_0361 | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase; STAS domain; TIGRFAM: anti-anti-sigma factor. | 0.408 |
AFY29269.1 | AFY28299.1 | Cyagr_2153 | Cyagr_1120 | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.624 |
AFY29269.1 | AFY28401.1 | Cyagr_2153 | Cyagr_1223 | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family. | 0.470 |
AFY29269.1 | AFY29267.1 | Cyagr_2153 | Cyagr_2151 | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | tRNA nucleotidyltransferase/poly(A) polymerase; PFAM: Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.442 |
AFY29269.1 | AFY29268.1 | Cyagr_2153 | Cyagr_2152 | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | Hypothetical protein. | 0.775 |
AFY29269.1 | AFY29270.1 | Cyagr_2153 | Cyagr_2154 | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. | 0.520 |
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