STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY29525.1Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase. (426 aa)    
Predicted Functional Partners:
AFY29523.1
TIGRFAM: photosystem II protein PsbQ.
 
     0.823
AFY28601.1
Hypothetical protein.
 
     0.785
AFY28355.1
Putative anaerobic dehydrogenase; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
  
     0.769
AFY29189.1
Organic solvent tolerance protein OstA; PFAM: Protein of unknown function (DUF3769).
  
     0.769
AFY27598.1
PFAM: Protein of unknown function (DUF2605).
  
     0.766
AFY27941.1
Hypothetical protein.
  
    0.762
AFY30056.1
PFAM: Protein of unknown function (DUF3120).
  
     0.760
AFY27611.1
Tryptophan-rich sensory protein; PFAM: TspO/MBR family.
  
     0.748
AFY28077.1
Hypothetical protein.
  
     0.748
AFY28109.1
glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase.
  
     0.748
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.