STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY29615.1Hypothetical protein. (430 aa)    
Predicted Functional Partners:
AFY29614.1
PFAM: Glycosyl transferase family 2.
     0.992
AFY29616.1
PFAM: Protein of unknown function, DUF547.
 
     0.864
AFY29686.1
Phage-related lysozyme (muraminidase); PFAM: L,D-transpeptidase catalytic domain.
  
     0.682
AFY28169.1
Putative protease of the Abi (CAAX) family; PFAM: CAAX amino terminal protease family.
  
     0.650
AFY30337.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
     0.629
AFY29613.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; SNARE associated Golgi protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.547
AFY28932.1
Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
  
     0.515
AFY27599.1
PFAM: Protein of unknown function, DUF547.
  
     0.492
AFY29704.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.454
AFY28988.1
PFAM: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
    0.453
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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