STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY30087.1PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; Belongs to the MlaE permease family. (249 aa)    
Predicted Functional Partners:
AFY29246.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
 0.999
AFY29245.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
 
 0.977
AFY29648.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
  
 0.967
AFY30086.1
PFAM: Protein of unknown function (DUF3119).
 
     0.822
AFY30088.1
Na+/melibiose symporter-like transporter; PFAM: Major Facilitator Superfamily.
       0.798
AFY30085.1
PFAM: Protein of unknown function (DUF3086).
       0.783
AFY27703.1
ABC-type (unclassified) transport system, ATPase component; PFAM: ABC transporter.
 
  
  0.781
plsY
Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.749
AFY30197.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat; Surface antigen.
 
     0.730
AFY27555.1
Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase; STAS domain; TIGRFAM: anti-anti-sigma factor.
   
   0.694
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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