STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY30493.1Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (133 aa)    
Predicted Functional Partners:
AFY30492.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 
 0.936
AFY30491.1
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: Stage II sporulation protein E (SpoIIE); Cyclic nucleotide-binding domain.
  
 
 0.900
AFY27554.1
Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.732
AFY27664.1
Hypothetical protein.
  
 
 0.732
AFY29246.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
   
   0.702
AFY27746.1
PFAM: Protein of unknown function (DUF3370).
   
    0.693
AFY30087.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; Belongs to the MlaE permease family.
   
   0.686
AFY29670.1
PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
  
 0.605
AFY27567.1
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
  
 
 0.564
AFY27856.1
PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
  
 
 0.564
Your Current Organism:
Cyanobium gracile
NCBI taxonomy Id: 292564
Other names: C. gracile PCC 6307, Coccochloris peniocystis UTCC 70 (no longer available), Coccochloris peniocystis UTCC 71, Cyanobium gracile PCC 6307, Synechococcus sp. ATCC 27147, Synechococcus sp. PCC 6307
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