STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU41328.1Stage III sporulation protein AG; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)    
Predicted Functional Partners:
ANU41327.1
Stage III sporulation protein AH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.998
ANU41334.1
Stage III sporulation protein AB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.985
ANU41330.1
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.981
ANU41332.1
Stage III sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
ANU41333.1
Stage III sporulation protein AB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.962
ANU41331.1
Stage III sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.924
ANU41329.1
Stage III sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.817
ANU42846.1
Stage II sporulation protein P; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.784
ANU41246.2
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.745
ANU40532.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
Your Current Organism:
Flavonifractor plautii
NCBI taxonomy Id: 292800
Other names: ATCC 29863, ATCC 49531 [[Clostridium orbiscindens]], Bacillus plauti, CCUG 28093, Clostridium orbiscindens, DSM 4000, DSM 6740 [[Clostridium orbiscindens]], DSM 6749 [[Clostridium orbiscindens]], Eubacterium plautii, F. plautii, Fusobacterium plautii, Fusocillus plauti, Pseudoflavonifractor sp. YL31, Zuberella plauti, strain Prevot S1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.