STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU42641.1Glycine radical enzyme activase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)    
Predicted Functional Partners:
ANU42640.1
YjjI family glycine radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.984
ANU39670.1
Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.948
ANU42639.1
Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.806
ANU40296.1
Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.648
ANU42771.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.646
ANU39948.1
Acetaldehyde dehydrogenase (acetylating); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.517
ARE59859.1
Acetaldehyde dehydrogenase (acetylating); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.501
ANU42642.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.480
ANU40056.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
ANU42643.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
Your Current Organism:
Flavonifractor plautii
NCBI taxonomy Id: 292800
Other names: ATCC 29863, ATCC 49531 [[Clostridium orbiscindens]], Bacillus plauti, CCUG 28093, Clostridium orbiscindens, DSM 4000, DSM 6740 [[Clostridium orbiscindens]], DSM 6749 [[Clostridium orbiscindens]], Eubacterium plautii, F. plautii, Fusobacterium plautii, Fusocillus plauti, Pseudoflavonifractor sp. YL31, Zuberella plauti, strain Prevot S1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.