Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Wbm0641Type IV secretory pathway, component VirB8. (222 aa)    
Predicted Functional Partners:
Wbm0281
Type IV secretory pathway, VirB10 component.
  
 
 0.934
Wbm0798
Type IV secretory pathway, VirB3 components.
  
 
 0.916
Wbm0279
Type IV secretory pathway, component VirB8.
     
 0.913
Wbm0750
Type IV secretory pathway, VirB4 components.
  
 
 0.798
Wbm0797
Type IV secretory pathway, VirB4 components.
  
 
 0.772
Wbm0796
Type IV secretory pathway, VirB6 components.
  
 
 0.727
Wbm0793
Type IV secretory pathway, VirB6 components.
  
 
 0.704
Wbm0794
Type IV secretory pathway, VirB6 components.
  
 
 0.704
Wbm0795
Type IV secretory pathway, VirB6 components.
  
 
 0.704
Wbm0591
Type IV secretory pathway, VirB9 component.
  
  
 0.660
Your Current Organism:
Wolbachia endosymbiont strain
NCBI taxonomy Id: 292805
Other names: W. endosymbiont strain TRS of Brugia malayi, Wolbachia endosymbiont strain TRS of Brugia malayi, Wolbachia malayi TRS
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