Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Wbm0209 | Wbm0559 | Wbm0209 | Wbm0559 | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Dihydrolipoamide dehydrogenase E3 component. | 0.594 |
Wbm0209 | Wbm0666 | Wbm0209 | Wbm0666 | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.915 |
Wbm0209 | Wbm0674 | Wbm0209 | Wbm0674 | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Malic enzyme. | 0.957 |
Wbm0209 | Wbm0686 | Wbm0209 | Wbm0686 | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.873 |
Wbm0209 | Wbm0735 | Wbm0209 | Wbm0735 | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Citrate synthase; Belongs to the citrate synthase family. | 0.408 |
Wbm0209 | mdh | Wbm0209 | Wbm0244 | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.400 |
Wbm0209 | pdhA | Wbm0209 | Wbm0207 | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.960 |
Wbm0559 | Wbm0209 | Wbm0559 | Wbm0209 | Dihydrolipoamide dehydrogenase E3 component. | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.594 |
Wbm0559 | Wbm0561 | Wbm0559 | Wbm0561 | Dihydrolipoamide dehydrogenase E3 component. | Dihydrolipoamide dehydrogenase E3 component. | 0.922 |
Wbm0559 | Wbm0666 | Wbm0559 | Wbm0666 | Dihydrolipoamide dehydrogenase E3 component. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.998 |
Wbm0559 | Wbm0674 | Wbm0559 | Wbm0674 | Dihydrolipoamide dehydrogenase E3 component. | Malic enzyme. | 0.829 |
Wbm0559 | Wbm0735 | Wbm0559 | Wbm0735 | Dihydrolipoamide dehydrogenase E3 component. | Citrate synthase; Belongs to the citrate synthase family. | 0.728 |
Wbm0559 | fumC | Wbm0559 | Wbm0504 | Dihydrolipoamide dehydrogenase E3 component. | Fumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.598 |
Wbm0559 | mdh | Wbm0559 | Wbm0244 | Dihydrolipoamide dehydrogenase E3 component. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.720 |
Wbm0559 | pdhA | Wbm0559 | Wbm0207 | Dihydrolipoamide dehydrogenase E3 component. | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.996 |
Wbm0561 | Wbm0559 | Wbm0561 | Wbm0559 | Dihydrolipoamide dehydrogenase E3 component. | Dihydrolipoamide dehydrogenase E3 component. | 0.922 |
Wbm0561 | Wbm0666 | Wbm0561 | Wbm0666 | Dihydrolipoamide dehydrogenase E3 component. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.997 |
Wbm0561 | Wbm0674 | Wbm0561 | Wbm0674 | Dihydrolipoamide dehydrogenase E3 component. | Malic enzyme. | 0.818 |
Wbm0561 | Wbm0735 | Wbm0561 | Wbm0735 | Dihydrolipoamide dehydrogenase E3 component. | Citrate synthase; Belongs to the citrate synthase family. | 0.468 |
Wbm0561 | mdh | Wbm0561 | Wbm0244 | Dihydrolipoamide dehydrogenase E3 component. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.423 |
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