Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALC10376.1 | ALC11176.1 | LH20_00225 | LH20_04340 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.568 |
| ALC10376.1 | ALC11511.1 | LH20_00225 | LH20_06040 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| ALC10376.1 | ALC12157.1 | LH20_00225 | LH20_09370 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
| ALC10376.1 | ALC13473.1 | LH20_00225 | LH20_16060 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. | 0.410 |
| ALC10376.1 | pth | LH20_00225 | LH20_00230 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.794 |
| ALC10376.1 | rplY | LH20_00225 | LH20_00235 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.603 |
| ALC11176.1 | ALC10376.1 | LH20_04340 | LH20_00225 | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.568 |
| ALC11511.1 | ALC10376.1 | LH20_06040 | LH20_00225 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| ALC12157.1 | ALC10376.1 | LH20_09370 | LH20_00225 | Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
| ALC13473.1 | ALC10376.1 | LH20_16060 | LH20_00225 | ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
| pth | ALC10376.1 | LH20_00230 | LH20_00225 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.794 |
| pth | rplY | LH20_00230 | LH20_00235 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.882 |
| rplY | ALC10376.1 | LH20_00235 | LH20_00225 | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.603 |
| rplY | pth | LH20_00235 | LH20_00230 | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.882 |