STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC11065.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)    
Predicted Functional Partners:
ALC12891.1
Hypothetical protein; Identified by MetaGeneAnnotator; K00540.
  
     0.684
ALC11066.1
Glycolate utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.667
ALC11064.1
Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.658
ALC11063.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    
0.628
ALC12889.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.625
ALC11611.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.587
ALC14143.1
3-oxoacyl-[acyl-carrier protein] reductase; Product name was assigned by KAAS; K00059.
 
 
 0.582
ALC11088.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.581
ALC10491.1
3-oxoacyl-[acyl-carrier protein] reductase; Product name was assigned by KAAS; K00059.
 
 
 0.573
ALC12917.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.555
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.