STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC11141.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)    
Predicted Functional Partners:
ALC11142.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
0.879
ALC11146.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
ALC11140.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
proC
Hypothetical protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.781
ALC11144.1
Alpha-ketoglutarate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
ALC11145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.701
ALC11147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.599
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.496
hutH
Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.495
ALC11139.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
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