STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC11327.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (206 aa)    
Predicted Functional Partners:
ALC11328.1
Calpastatin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
ALC13925.1
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
ALC11425.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.574
ALC12134.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.574
ALC11427.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
    0.564
ALC12136.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.564
ALC11326.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
ALC10646.1
Nucleotidyltransferase; Identified by MetaGeneAnnotator.
  
     0.539
ALC10648.1
HEPN domain-containing protein; Identified by MetaGeneAnnotator.
  
     0.534
ALC11353.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.