STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC11376.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)    
Predicted Functional Partners:
ALC11381.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.872
ALC11377.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.857
ALC11380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.850
ALC11374.1
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
 
  
 0.843
ALC11375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.838
ALC11379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.713
ALC11378.1
Exodeoxyribonuclease III; Product name was assigned by KAAS; K01142.
       0.712
ALC12686.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.674
ALC11372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.637
ALC11373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.622
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.