STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC11383.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa)    
Predicted Functional Partners:
ALC11387.1
Conjugal transfer protein TrbL; Type IV secretion VirB6 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.944
ALC11389.1
Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.942
ALC11384.1
Conjugal transfer protein TraI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.928
ALC11386.1
Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.927
ALC11388.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.920
ALC11391.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.884
ALC11385.1
Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.882
ALC11390.1
Conjugal transfer protein TrbE; Type IV secretion system VirB4 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.829
ALC11392.1
Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
ALC10708.1
Conjugal transfer protein TrbL; Type IV secretion VirB6 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.759
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.