Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALC10363.1 | ALC11703.1 | LH20_00160 | LH20_07030 | Peptidase M23B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
| ALC11702.1 | ALC11703.1 | LH20_07025 | LH20_07030 | RNA polymerase sigma 32 subunit; Identified by MetaGeneAnnotator. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
| ALC11702.1 | rpoH | LH20_07025 | LH20_07035 | RNA polymerase sigma 32 subunit; Identified by MetaGeneAnnotator. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.424 |
| ALC11703.1 | ALC10363.1 | LH20_07030 | LH20_00160 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M23B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
| ALC11703.1 | ALC11702.1 | LH20_07030 | LH20_07025 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma 32 subunit; Identified by MetaGeneAnnotator. | 0.504 |
| ALC11703.1 | ALC11705.1 | LH20_07030 | LH20_07040 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.486 |
| ALC11703.1 | ALC11708.1 | LH20_07030 | LH20_07055 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.470 |
| ALC11703.1 | ALC13438.1 | LH20_07030 | LH20_15885 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M23B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
| ALC11703.1 | ALC13947.1 | LH20_07030 | LH20_18475 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| ALC11703.1 | rpoH | LH20_07030 | LH20_07035 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.678 |
| ALC11705.1 | ALC11703.1 | LH20_07040 | LH20_07030 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.486 |
| ALC11705.1 | ALC11708.1 | LH20_07040 | LH20_07055 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.526 |
| ALC11705.1 | rpoH | LH20_07040 | LH20_07035 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.794 |
| ALC11708.1 | ALC11703.1 | LH20_07055 | LH20_07030 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.470 |
| ALC11708.1 | ALC11705.1 | LH20_07055 | LH20_07040 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.526 |
| ALC11708.1 | rpoH | LH20_07055 | LH20_07035 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.467 |
| ALC13438.1 | ALC11703.1 | LH20_15885 | LH20_07030 | Peptidase M23B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
| ALC13947.1 | ALC11703.1 | LH20_18475 | LH20_07030 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| rpoH | ALC11702.1 | LH20_07035 | LH20_07025 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | RNA polymerase sigma 32 subunit; Identified by MetaGeneAnnotator. | 0.424 |
| rpoH | ALC11703.1 | LH20_07035 | LH20_07030 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.678 |
page 1 of 2