ALC12109.1 protein (Sphingopyxis sp. 113P3) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ALC12109.1

Transposase; Product name was assigned by KAAS; K07483. (83 aa)

Predicted Functional Partners:

ALC12110.1

0.757

ALC11116.1

0.739

ALC12705.1

0.739

ALC14087.1

0.739

ALC11641.1

0.738

ALC14086.1

0.604

ALC11115.1

0.602

ALC11642.1

0.601

ALC12704.1

0.598

ALC11114.1

0.584

Your Current Organism:

Sphingopyxis sp. 113P3

NCBI taxonomy Id: 292913
Other names: S. sp. 113P3

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC11114.1	ALC11115.1	LH20_04025	LH20_04030	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
ALC11114.1	ALC11116.1	LH20_04025	LH20_04035	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
ALC11114.1	ALC11641.1	LH20_04025	LH20_06705	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
ALC11114.1	ALC11642.1	LH20_04025	LH20_06710	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
ALC11114.1	ALC12109.1	LH20_04025	LH20_09125	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Product name was assigned by KAAS; K07483.	0.584
ALC11114.1	ALC12704.1	LH20_04025	LH20_12150	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
ALC11114.1	ALC12705.1	LH20_04025	LH20_12155	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
ALC11114.1	ALC14086.1	LH20_04025	LH20_19175	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
ALC11114.1	ALC14087.1	LH20_04025	LH20_19180	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
ALC11115.1	ALC11114.1	LH20_04030	LH20_04025	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
ALC11115.1	ALC11116.1	LH20_04030	LH20_04035	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
ALC11115.1	ALC12109.1	LH20_04030	LH20_09125	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Product name was assigned by KAAS; K07483.	0.602
ALC11116.1	ALC11114.1	LH20_04035	LH20_04025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
ALC11116.1	ALC11115.1	LH20_04035	LH20_04030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
ALC11116.1	ALC12109.1	LH20_04035	LH20_09125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Product name was assigned by KAAS; K07483.	0.739
ALC11641.1	ALC11114.1	LH20_06705	LH20_04025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
ALC11641.1	ALC11642.1	LH20_06705	LH20_06710	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
ALC11641.1	ALC12109.1	LH20_06705	LH20_09125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Product name was assigned by KAAS; K07483.	0.738
ALC11642.1	ALC11114.1	LH20_06710	LH20_04025	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
ALC11642.1	ALC11641.1	LH20_06710	LH20_06705	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835