STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC13699.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (851 aa)    
Predicted Functional Partners:
ALC13700.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.913
ALC10659.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.803
ALC11618.1
Structural toxin protein RtxA; Identified by MetaGeneAnnotator.
  
 
 0.777
ALC14238.1
Protein tyrosine kinase family; Identified by MetaGeneAnnotator.
  
 
 0.777
ALC11886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.520
ALC14527.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.467
ALC14515.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.447
ALC10974.1
Hemin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.418
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.401
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.